1IGT
STRUCTURE OF IMMUNOGLOBULIN
- PDB DOI: https://doi.org/10.2210/pdb1IGT/pdb
- Classification: IMMUNOGLOBULIN
- Organism(s): Mus musculus
- Mutation(s): No 
- Deposited: 1996-10-25 Released: 1997-07-07 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.297 
- R-Value Work: 0.209 
- R-Value Observed: 0.209 
wwPDB Validation   3D Report Full Report
This is version 2.1 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
IGG2A INTACT ANTIBODY - MAB231 | 214 | Mus musculus | Mutation(s): 0  | ||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
IGG2A INTACT ANTIBODY - MAB231 | 444 | Mus musculus | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for P01863 (Mus musculus) Explore P01863  Go to UniProtKB:  P01863 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P01863 | ||||
Sequence AnnotationsExpand | |||||
|
Oligosaccharides
Entity ID: 3 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | 2D Diagram | Glycosylation | 3D Interactions |
beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | E | 9 | N-Glycosylation | ||
Glycosylation Resources | |||||
GlyTouCan:  G33244HE GlyCosmos:  G33244HE GlyGen:  G33244HE |
Entity ID: 4 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | 2D Diagram | Glycosylation | 3D Interactions |
beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | F | 9 | N-Glycosylation | ||
Glycosylation Resources | |||||
GlyTouCan:  G27919IH GlyCosmos:  G27919IH GlyGen:  G27919IH |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.297 
- R-Value Work: 0.209 
- R-Value Observed: 0.209 
- Space Group: P 1
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 65.82 | α = 88.05 |
b = 76.77 | β = 92.35 |
c = 100.64 | γ = 97.23 |
Software Name | Purpose |
---|---|
HOWARD | data collection |
NIELSEN | data collection |
HOWARD | data reduction |
NIELSEN | data reduction |
X-PLOR | model building |
X-PLOR | refinement |
XENGEN | data reduction |
XUONG) | data reduction |
XENGEN | data scaling |
NIELSEN | data scaling |
XUONG) | data scaling |
X-PLOR | phasing |
Entry History 
Deposition Data
- Released Date: 1997-07-07  Deposition Author(s): Harris, L.J., Larson, S.B., Hasel, K.W., McPherson, A.
Revision History (Full details and data files)
- Version 1.0: 1997-07-07
Type: Initial release - Version 1.1: 2008-03-03
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Non-polymer description, Version format compliance - Version 2.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Advisory, Atomic model, Data collection, Derived calculations, Other, Structure summary - Version 2.1: 2023-08-09
Changes: Advisory, Database references, Refinement description, Structure summary