Published quarterly by the Research Collaboratory
for Structural Bioinformatics Protein Data Bank

Summer 2008
Number 38

 
NEWSLETTER
  Contents  
Home | Newsletter Archive | PDF Version | Text-only Version
Data Deposition
SF-Tool: A Tool for Crystallographic Experimental Data Validation
Ligand Expo: A Small Molecule Resource
Workshop on Next Generation Validation Tools for the wwPDB
Deposition Statistics
Data Query, Reporting and Access
Website Statistics
Secondary Structure Information
RCSB PDB Usage Statistics
Outreach and Education
RCSB PDB Meetings and Presentations
RCSB PDB Poster Prize Awarded at ACA Meeting
Princeton High School Students Win New Jersey Science Olympiad Protein Modeling State Finals
Congratulations to National Tournament Champions
Papers Published
Structural Displays
Education Corner
Biochemistry and Molecular Biology Education, a Journal for University, College, and High School Educators by Judith G. Voet and Donald H. Voet
PDB Community Focus
John Norvell, Ph.D., National Institute of General Medical Sciences
RCSB PDB PARTNERS, MANAGEMENT, AND STATEMENT OF SUPPORT
 
       

 

Message from the RCSB PDB

The PDB archive reached a significant milestone in its 37-year history this past spring. The 50,000th molecule structure was released into the archive on April 8, 2008, joining other structures vital to biology, medicine, and education. The worldwide Protein Data Bank (wwPDB) has seen the archive double in size since 2004, and estimates that the size of the PDB archive will triple to 150,000 structures by the year 2014.

The archive was founded in 1971 with seven structures at Brookhaven National Laboratory. Today, the wwPDB receives approximately 25 new experimentally-determined structures from scientists each day. These data are checked and processed by annotators located around the world.

wwPDB members provide a variety of ways to explore PDB data by developing online databases that promote searching, reporting, and visualizing structures.

The wwPDB will exhibit at the XXI Congress and General Assembly of the International Union of Crystallography (August 21-31; Osaka, Japan). Please stop by booth #14 to learn about the latest developments.

Snapshot: July 1, 2008
51491
released atomic coordinate entries
Molecule Type
47526
proteins, peptides,
and viruses
1870
nucleic acids
2062
protein/nucleic acid
complexes

33

other
Experimental Technique
43855
X-ray
7355
NMR
182
electron microscopy
99
other
 
33017
structure factor files
4054
NMR restraint files
image
 
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©2008 RCSB PDB